Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Mir686-201ENSMUST00000102174 109 ntBASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Gm13369-201ENSMUST00000119442 987 ntBASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Gm29396-201ENSMUST00000185659 716 ntBASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.54□□□□□ -0.24
Cstf1Q99LC2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf1Q99LC2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 269.3 ms