Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Gm12241-201ENSMUST00000118330 726 ntBASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Gm29396-201ENSMUST00000185659 716 ntBASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Gm43758-201ENSMUST00000199500 367 ntBASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd2Q99JR8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Smarcd2Q99JR8 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Gm8805-201ENSMUST00000117848 313 ntBASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Cts7-204ENSMUST00000225321 1257 ntBASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Gm24526-201ENSMUST00000082921 158 ntBASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd2Q99JR8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Gm6447-201ENSMUST00000118905 835 ntBASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Gm4857-201ENSMUST00000192718 785 ntBASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Gm38341-201ENSMUST00000195357 515 ntBASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms