Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Gm46209-201ENSMUST00000217912 553 ntBASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhga11Q91XY8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhga11Q91XY8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhga11Q91XY8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Pcdhga11Q91XY8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhga11Q91XY8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Gm12585-201ENSMUST00000117307 290 ntBASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Gm27618-201ENSMUST00000183671 60 ntBASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Gm17837-201ENSMUST00000186435 985 ntBASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Mir497b-201ENSMUST00000093601 125 ntBASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga11Q91XY8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Gm3436-201ENSMUST00000179930 840 ntBASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms