Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.19□□□□□ -0.46
Odf4Q8VI88 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Odf4Q8VI88 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Odf4Q8VI88 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Odf4Q8VI88 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Odf4Q8VI88 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Odf4Q8VI88 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Odf4Q8VI88 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Odf4Q8VI88 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.18□□□□□ -0.46
Odf4Q8VI88 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.18□□□□□ -0.46
Odf4Q8VI88 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.18□□□□□ -0.46
Odf4Q8VI88 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Odf4Q8VI88 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.17□□□□□ -0.46
Odf4Q8VI88 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Gm7488-201ENSMUST00000117148 684 ntBASIC12.17□□□□□ -0.46
Odf4Q8VI88 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.17□□□□□ -0.46
Odf4Q8VI88 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.17□□□□□ -0.46
Odf4Q8VI88 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Dupd1-202ENSMUST00000224735 548 ntBASIC12.17□□□□□ -0.46
Odf4Q8VI88 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.17□□□□□ -0.46
Odf4Q8VI88 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.17□□□□□ -0.46
Odf4Q8VI88 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Gm27631-201ENSMUST00000184163 466 ntBASIC12.16□□□□□ -0.46
Odf4Q8VI88 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms