Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cchcr1Q8K2I2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Gm7775-201ENSMUST00000218871 853 ntBASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cchcr1Q8K2I2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Gm13616-201ENSMUST00000120600 222 ntBASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Gm9063-201ENSMUST00000223299 582 ntBASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms