Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ShfQ8CG80 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.11□□□□□ -0.47
ShfQ8CG80 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Gm3436-201ENSMUST00000179930 840 ntBASIC12.11□□□□□ -0.47
ShfQ8CG80 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Chchd1-203ENSMUST00000224633 557 ntBASIC12.11□□□□□ -0.47
ShfQ8CG80 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ShfQ8CG80 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.11□□□□□ -0.47
ShfQ8CG80 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm27397-201ENSMUST00000184997 107 ntBASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.1□□□□□ -0.47
ShfQ8CG80 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.1□□□□□ -0.47
ShfQ8CG80 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ShfQ8CG80 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ShfQ8CG80 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms