Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm7399-201ENSMUST00000032395 858 ntBASIC13.22□□□□□ -0.29
Rab43Q8CG50 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab43Q8CG50 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.21□□□□□ -0.29
Rab43Q8CG50 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Gm23931-201ENSMUST00000103842 109 ntBASIC13.21□□□□□ -0.29
Rab43Q8CG50 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.21□□□□□ -0.29
Rab43Q8CG50 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab43Q8CG50 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rab43Q8CG50 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rab43Q8CG50 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rab43Q8CG50 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab43Q8CG50 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rab43Q8CG50 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab43Q8CG50 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rab43Q8CG50 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rab43Q8CG50 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm12403-201ENSMUST00000121384 959 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm1335-201ENSMUST00000121653 386 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm16372-201ENSMUST00000073088 450 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms