Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Mir698-201ENSMUST00000102164 109 ntBASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Gm15240-201ENSMUST00000118156 720 ntBASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Mir6392-201ENSMUST00000184924 108 ntBASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pabpc5Q8C7D3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.65□□□□□ -0.22
Pabpc5Q8C7D3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pabpc5Q8C7D3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Gm4984-201ENSMUST00000115987 360 ntBASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Gm5279-201ENSMUST00000199575 745 ntBASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pabpc5Q8C7D3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pabpc5Q8C7D3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms