Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Gm43094-201ENSMUST00000196549 921 ntBASIC12.9□□□□□ -0.34
Eri3Q8C460 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Gm19220-201ENSMUST00000222682 803 ntBASIC12.9□□□□□ -0.34
Eri3Q8C460 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Eri3Q8C460 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Eri3Q8C460 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Eri3Q8C460 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Eri3Q8C460 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Eri3Q8C460 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Eri3Q8C460 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Eri3Q8C460 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.89□□□□□ -0.35
Eri3Q8C460 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Gm12859-201ENSMUST00000117834 427 ntBASIC12.89□□□□□ -0.35
Eri3Q8C460 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.89□□□□□ -0.35
Eri3Q8C460 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
Eri3Q8C460 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.89□□□□□ -0.35
Eri3Q8C460 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.89□□□□□ -0.35
Eri3Q8C460 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.89□□□□□ -0.35
Eri3Q8C460 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Eri3Q8C460 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.88□□□□□ -0.35
Eri3Q8C460 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Eri3Q8C460 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Gm11524-201ENSMUST00000119349 807 ntBASIC12.88□□□□□ -0.35
Eri3Q8C460 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.88□□□□□ -0.35
Eri3Q8C460 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.88□□□□□ -0.35
Eri3Q8C460 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Eri3Q8C460 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Eri3Q8C460 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Eri3Q8C460 Gm28631-201ENSMUST00000190740 334 ntBASIC12.88□□□□□ -0.35
Eri3Q8C460 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.88□□□□□ -0.35
Eri3Q8C460 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.88□□□□□ -0.35
Eri3Q8C460 Gm19078-201ENSMUST00000206311 727 ntBASIC12.88□□□□□ -0.35
Eri3Q8C460 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.88□□□□□ -0.35
Eri3Q8C460 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Eri3Q8C460 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.88□□□□□ -0.35
Eri3Q8C460 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.88□□□□□ -0.35
Eri3Q8C460 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.88□□□□□ -0.35
Eri3Q8C460 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Eri3Q8C460 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms