Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 BC001981-202ENSMUST00000191393 1545 ntBASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc90bQ8C3X2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Gm14140-201ENSMUST00000119999 995 ntBASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc90bQ8C3X2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Gm18737-201ENSMUST00000173594 937 ntBASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc90bQ8C3X2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms