Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gm15483-201ENSMUST00000120338 456 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gm13597-201ENSMUST00000121239 375 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gm15590-201ENSMUST00000078419 552 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco3Q8BQM7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Gm24589-201ENSMUST00000116692 94 ntBASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Gm27301-201ENSMUST00000184012 127 ntBASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Ank2-226ENSMUST00000189368 339 ntBASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco3Q8BQM7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Smco3Q8BQM7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Smco3Q8BQM7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.15□□□□□ -0.63
Smco3Q8BQM7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.15□□□□□ -0.63
Smco3Q8BQM7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Smco3Q8BQM7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smco3Q8BQM7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smco3Q8BQM7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms