Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Gm19208-201ENSMUST00000213861 912 ntBASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 CT009718.3-201ENSMUST00000221116 367 ntBASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col16a1Q8BLX7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Gm5597-201ENSMUST00000182353 1193 ntBASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Gm14267-206ENSMUST00000226870 1209 ntBASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col16a1Q8BLX7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Gm12502-201ENSMUST00000120197 444 ntBASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Gm8959-201ENSMUST00000213150 571 ntBASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col16a1Q8BLX7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Gm11930-201ENSMUST00000117788 190 ntBASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Gm12201-201ENSMUST00000120657 1234 ntBASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Gm8908-201ENSMUST00000121633 1024 ntBASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms