Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp1Q8BJQ2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Mir6420-201ENSMUST00000185032 102 ntBASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Gm42693-201ENSMUST00000196779 631 ntBASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp1Q8BJQ2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Gm12384-201ENSMUST00000119228 919 ntBASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Gm8584-201ENSMUST00000171982 758 ntBASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Usp1Q8BJQ2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Usp1Q8BJQ2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Usp1Q8BJQ2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp1Q8BJQ2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms