Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Prpf40bQ80W14 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
Prpf40bQ80W14 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Gm29199-201ENSMUST00000187766 775 ntBASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Gm19184-201ENSMUST00000196798 928 ntBASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf40bQ80W14 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Gm16177-201ENSMUST00000120728 718 ntBASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Mir5132-201ENSMUST00000175166 71 ntBASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Gm7783-201ENSMUST00000204795 781 ntBASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Gm45930-201ENSMUST00000221330 292 ntBASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf40bQ80W14 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Gm13612-201ENSMUST00000119276 390 ntBASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Gm13689-201ENSMUST00000119360 685 ntBASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf40bQ80W14 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms