Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timd4Q6U7R4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Gm26464-201ENSMUST00000157094 305 ntBASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Mir6392-201ENSMUST00000184924 108 ntBASIC12.61□□□□□ -0.39
Timd4Q6U7R4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Gm6180-201ENSMUST00000065243 498 ntBASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.61□□□□□ -0.39
Timd4Q6U7R4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Gm11524-201ENSMUST00000119349 807 ntBASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Gm23984-201ENSMUST00000157139 203 ntBASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.6□□□□□ -0.39
Timd4Q6U7R4 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Gm17330-201ENSMUST00000221047 165 ntBASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Timd4Q6U7R4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms