Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Gm20426-201ENSMUST00000173657 440 ntBASIC15.65■□□□□ 0.1
Scn9aQ62205 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.65■□□□□ 0.1
Scn9aQ62205 Gm44405-201ENSMUST00000198952 126 ntBASIC15.65■□□□□ 0.1
Scn9aQ62205 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.65■□□□□ 0.1
Scn9aQ62205 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.65■□□□□ 0.1
Scn9aQ62205 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.65■□□□□ 0.1
Scn9aQ62205 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scn9aQ62205 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scn9aQ62205 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scn9aQ62205 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Scn9aQ62205 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12616-201ENSMUST00000118594 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm15547-201ENSMUST00000122152 333 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12624-201ENSMUST00000177615 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12621-201ENSMUST00000177760 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12615-201ENSMUST00000177970 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12622-201ENSMUST00000177975 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12627-201ENSMUST00000178412 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12625-201ENSMUST00000179122 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12614-201ENSMUST00000179586 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm12613-201ENSMUST00000180323 382 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm2546-201ENSMUST00000182630 991 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.64■□□□□ 0.09
Scn9aQ62205 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.64■□□□□ 0.09
Scn9aQ62205 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.64■□□□□ 0.09
Scn9aQ62205 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Scn9aQ62205 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.64■□□□□ 0.09
Scn9aQ62205 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Scn9aQ62205 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn9aQ62205 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.63■□□□□ 0.09
Scn9aQ62205 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.63■□□□□ 0.09
Scn9aQ62205 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scn9aQ62205 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.62■□□□□ 0.09
Scn9aQ62205 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Scn9aQ62205 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.62■□□□□ 0.09
Scn9aQ62205 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.62■□□□□ 0.09
Scn9aQ62205 Gm45770-201ENSMUST00000212105 616 ntBASIC15.62■□□□□ 0.09
Scn9aQ62205 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scn9aQ62205 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms