Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.7□□□□□ -0.38
Sox17Q61473 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.7□□□□□ -0.38
Sox17Q61473 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.7□□□□□ -0.38
Sox17Q61473 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Sox17Q61473 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox17Q61473 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox17Q61473 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.7□□□□□ -0.38
Sox17Q61473 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sox17Q61473 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sox17Q61473 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sox17Q61473 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox17Q61473 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox17Q61473 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox17Q61473 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox17Q61473 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox17Q61473 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox17Q61473 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.69□□□□□ -0.38
Sox17Q61473 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Gm2810-201ENSMUST00000118681 990 ntBASIC12.69□□□□□ -0.38
Sox17Q61473 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.69□□□□□ -0.38
Sox17Q61473 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Sox17Q61473 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.69□□□□□ -0.38
Sox17Q61473 Gm18195-201ENSMUST00000207604 706 ntBASIC12.69□□□□□ -0.38
Sox17Q61473 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox17Q61473 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox17Q61473 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Sox17Q61473 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox17Q61473 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sox17Q61473 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sox17Q61473 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox17Q61473 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sox17Q61473 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.68□□□□□ -0.38
Sox17Q61473 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Sox17Q61473 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox17Q61473 Gm6443-201ENSMUST00000203599 874 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms