Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ripk1Q60855 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ripk1Q60855 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ripk1Q60855 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ripk1Q60855 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ripk1Q60855 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.81□□□□□ -0.36
Ripk1Q60855 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.81□□□□□ -0.36
Ripk1Q60855 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.81□□□□□ -0.36
Ripk1Q60855 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.81□□□□□ -0.36
Ripk1Q60855 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.81□□□□□ -0.36
Ripk1Q60855 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.81□□□□□ -0.36
Ripk1Q60855 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.81□□□□□ -0.36
Ripk1Q60855 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.81□□□□□ -0.36
Ripk1Q60855 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.81□□□□□ -0.36
Ripk1Q60855 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ripk1Q60855 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ripk1Q60855 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.81□□□□□ -0.36
Ripk1Q60855 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ripk1Q60855 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.8□□□□□ -0.36
Ripk1Q60855 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.8□□□□□ -0.36
Ripk1Q60855 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.8□□□□□ -0.36
Ripk1Q60855 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.8□□□□□ -0.36
Ripk1Q60855 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ripk1Q60855 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ripk1Q60855 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ripk1Q60855 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ripk1Q60855 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ripk1Q60855 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.79□□□□□ -0.36
Ripk1Q60855 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ripk1Q60855 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ripk1Q60855 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ripk1Q60855 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ripk1Q60855 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ripk1Q60855 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ripk1Q60855 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.79□□□□□ -0.36
Ripk1Q60855 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.79□□□□□ -0.36
Ripk1Q60855 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.79□□□□□ -0.36
Ripk1Q60855 Gm15240-201ENSMUST00000118156 720 ntBASIC12.79□□□□□ -0.36
Ripk1Q60855 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms