Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Khdc4Q3TCX3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Gm5425-201ENSMUST00000214125 459 ntBASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Khdc4Q3TCX3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Gm11425-201ENSMUST00000119608 498 ntBASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Gm44608-201ENSMUST00000206827 855 ntBASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Gm9396-201ENSMUST00000076703 567 ntBASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Gm5356-201ENSMUST00000093326 615 ntBASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Khdc4Q3TCX3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Gm37714-201ENSMUST00000194742 342 ntBASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Khdc4Q3TCX3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms