Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm8451-201ENSMUST00000170338 447 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm7238-201ENSMUST00000206467 973 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm7536-201ENSMUST00000077389 444 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm5453-201ENSMUST00000080866 447 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Gm8737-201ENSMUST00000122208 642 ntBASIC6.96□□□□□ -1.29
Ush2AQ2QI47 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Gm2345-201ENSMUST00000193451 589 ntBASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Gm44814-201ENSMUST00000207018 434 ntBASIC6.96□□□□□ -1.29
Ush2AQ2QI47 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ush2AQ2QI47 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Aprt-ps-201ENSMUST00000212311 505 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm9204-201ENSMUST00000212641 947 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm19430-201ENSMUST00000193847 2137 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 AC093043.3-201ENSMUST00000226531 2273 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm3809-201ENSMUST00000180973 1006 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 AC165260.2-203ENSMUST00000224237 336 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm10728-201ENSMUST00000194292 1829 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ush2AQ2QI47 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms