Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Gm27682-201ENSMUST00000183930 110 ntBASIC12.99□□□□□ -0.33
Hoxc4Q08624 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxc4Q08624 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.99□□□□□ -0.33
Hoxc4Q08624 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc4Q08624 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gm16202-201ENSMUST00000117532 544 ntBASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gm2231-201ENSMUST00000125661 612 ntBASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Mir1938-201ENSMUST00000158746 100 ntBASIC12.98□□□□□ -0.33
Hoxc4Q08624 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.98□□□□□ -0.33
Hoxc4Q08624 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.98□□□□□ -0.33
Hoxc4Q08624 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.98□□□□□ -0.33
Hoxc4Q08624 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxc4Q08624 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Gm13369-201ENSMUST00000119442 987 ntBASIC12.97□□□□□ -0.33
Hoxc4Q08624 Gm1335-201ENSMUST00000121653 386 ntBASIC12.97□□□□□ -0.33
Hoxc4Q08624 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc4Q08624 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.97□□□□□ -0.33
Hoxc4Q08624 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms