Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a1Q05722 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.35□□□□□ -0.27
Col9a1Q05722 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Col9a1Q05722 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col9a1Q05722 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col9a1Q05722 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm12601-201ENSMUST00000118994 846 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm11622-201ENSMUST00000120525 691 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.34□□□□□ -0.27
Col9a1Q05722 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm7848-201ENSMUST00000210739 718 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm5781-201ENSMUST00000219792 443 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Col9a1Q05722 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.34□□□□□ -0.27
Col9a1Q05722 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Col9a1Q05722 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a1Q05722 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.33□□□□□ -0.27
Col9a1Q05722 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col9a1Q05722 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Col9a1Q05722 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.33□□□□□ -0.28
Col9a1Q05722 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.33□□□□□ -0.28
Col9a1Q05722 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.33□□□□□ -0.28
Col9a1Q05722 Gm28438-201ENSMUST00000188299 345 ntBASIC13.33□□□□□ -0.28
Col9a1Q05722 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Gm37631-201ENSMUST00000192275 364 ntBASIC13.33□□□□□ -0.28
Col9a1Q05722 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.33□□□□□ -0.28
Col9a1Q05722 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.33□□□□□ -0.28
Col9a1Q05722 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.33□□□□□ -0.28
Col9a1Q05722 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC13.33□□□□□ -0.28
Col9a1Q05722 AC154595.1-201ENSMUST00000225533 1059 ntBASIC13.33□□□□□ -0.28
Col9a1Q05722 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col9a1Q05722 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col9a1Q05722 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col9a1Q05722 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col9a1Q05722 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a1Q05722 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.33□□□□□ -0.28
Col9a1Q05722 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col9a1Q05722 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms