Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a2Q02788 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a2Q02788 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a2Q02788 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a2Q02788 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm13829-201ENSMUST00000119600 138 ntBASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm38671-201ENSMUST00000200573 130 ntBASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm6266-201ENSMUST00000203844 806 ntBASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm7287-201ENSMUST00000205267 602 ntBASIC13.53□□□□□ -0.24
Col6a2Q02788 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm17330-201ENSMUST00000221047 165 ntBASIC13.53□□□□□ -0.24
Col6a2Q02788 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col6a2Q02788 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a2Q02788 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a2Q02788 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a2Q02788 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.24
Col6a2Q02788 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a2Q02788 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a2Q02788 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a2Q02788 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a2Q02788 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.52□□□□□ -0.25
Col6a2Q02788 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Gm27486-201ENSMUST00000184923 80 ntBASIC13.52□□□□□ -0.25
Col6a2Q02788 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.52□□□□□ -0.25
Col6a2Q02788 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.52□□□□□ -0.25
Col6a2Q02788 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Col6a2Q02788 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a2Q02788 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms