Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Gfra1P97785 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Gm15770-201ENSMUST00000117498 584 ntBASIC11.22□□□□□ -0.61
Gfra1P97785 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Gfra1P97785 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Gfra1P97785 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Gfra1P97785 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.22□□□□□ -0.61
Gfra1P97785 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.22□□□□□ -0.61
Gfra1P97785 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Gfra1P97785 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Gfra1P97785 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gfra1P97785 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Gfra1P97785 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.21□□□□□ -0.61
Gfra1P97785 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.21□□□□□ -0.61
Gfra1P97785 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Gfra1P97785 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.21□□□□□ -0.61
Gfra1P97785 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.21□□□□□ -0.61
Gfra1P97785 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.21□□□□□ -0.61
Gfra1P97785 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Gfra1P97785 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.21□□□□□ -0.61
Gfra1P97785 Gm15429-201ENSMUST00000151268 798 ntBASIC11.21□□□□□ -0.61
Gfra1P97785 Gm38223-201ENSMUST00000194484 695 ntBASIC11.21□□□□□ -0.61
Gfra1P97785 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.21□□□□□ -0.61
Gfra1P97785 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.21□□□□□ -0.61
Gfra1P97785 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Gfra1P97785 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gfra1P97785 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.21□□□□□ -0.62
Gfra1P97785 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Gfra1P97785 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Gfra1P97785 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gfra1P97785 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Gfra1P97785 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Gfra1P97785 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.2□□□□□ -0.62
Gfra1P97785 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.2□□□□□ -0.62
Gfra1P97785 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gfra1P97785 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.2□□□□□ -0.62
Gfra1P97785 Gm15678-201ENSMUST00000117573 960 ntBASIC11.2□□□□□ -0.62
Gfra1P97785 Gm15376-201ENSMUST00000122258 783 ntBASIC11.2□□□□□ -0.62
Gfra1P97785 Mir1894-201ENSMUST00000122802 81 ntBASIC11.2□□□□□ -0.62
Gfra1P97785 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.2□□□□□ -0.62
Gfra1P97785 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.2□□□□□ -0.62
Gfra1P97785 Gm27892-201ENSMUST00000185017 106 ntBASIC11.2□□□□□ -0.62
Gfra1P97785 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms