Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm6912-201ENSMUST00000117218 544 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm24420-201ENSMUST00000176676 59 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm5866-201ENSMUST00000177881 973 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm2445-201ENSMUST00000182798 989 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm28760-201ENSMUST00000185995 736 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm17795-201ENSMUST00000214505 757 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Acot6-202ENSMUST00000222921 3622 ntBASIC11.31□□□□□ -0.6
Pdlim4P70271 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pdlim4P70271 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdlim4P70271 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pdlim4P70271 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pdlim4P70271 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pdlim4P70271 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.3□□□□□ -0.6
Pdlim4P70271 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Gm18905-201ENSMUST00000205454 928 ntBASIC11.3□□□□□ -0.6
Pdlim4P70271 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.3□□□□□ -0.6
Pdlim4P70271 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.3□□□□□ -0.6
Pdlim4P70271 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.3□□□□□ -0.6
Pdlim4P70271 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.3□□□□□ -0.6
Pdlim4P70271 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.3□□□□□ -0.6
Pdlim4P70271 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.3□□□□□ -0.6
Pdlim4P70271 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.3□□□□□ -0.6
Pdlim4P70271 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pdlim4P70271 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.3□□□□□ -0.6
Pdlim4P70271 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.3□□□□□ -0.6
Pdlim4P70271 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms