Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfn1P62962 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Pfn1P62962 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfn1P62962 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfn1P62962 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfn1P62962 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfn1P62962 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfn1P62962 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Pfn1P62962 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Gm11452-201ENSMUST00000122376 690 ntBASIC10.52□□□□□ -0.73
Pfn1P62962 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Gm10275-202ENSMUST00000168697 495 ntBASIC10.52□□□□□ -0.73
Pfn1P62962 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pfn1P62962 Gm28659-201ENSMUST00000188013 759 ntBASIC10.52□□□□□ -0.73
Pfn1P62962 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.52□□□□□ -0.73
Pfn1P62962 Thap2-203ENSMUST00000218989 527 ntBASIC10.52□□□□□ -0.73
Pfn1P62962 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pfn1P62962 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Gm10275-201ENSMUST00000092620 635 ntBASIC10.52□□□□□ -0.73
Pfn1P62962 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pfn1P62962 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pfn1P62962 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Pfn1P62962 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pfn1P62962 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfn1P62962 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pfn1P62962 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pfn1P62962 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pfn1P62962 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pfn1P62962 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pfn1P62962 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.51□□□□□ -0.73
Pfn1P62962 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.51□□□□□ -0.73
Pfn1P62962 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Gm18195-201ENSMUST00000207604 706 ntBASIC10.51□□□□□ -0.73
Pfn1P62962 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.51□□□□□ -0.73
Pfn1P62962 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.51□□□□□ -0.73
Pfn1P62962 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Pfn1P62962 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pfn1P62962 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pfn1P62962 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Pfn1P62962 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pfn1P62962 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfn1P62962 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.51□□□□□ -0.73
Pfn1P62962 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pfn1P62962 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms