Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Gm22018-201ENSMUST00000104357 131 ntBASIC10.92□□□□□ -0.66
Lmo4P61969 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Mir1247-201ENSMUST00000116706 82 ntBASIC10.92□□□□□ -0.66
Lmo4P61969 Gm13123-201ENSMUST00000122173 492 ntBASIC10.92□□□□□ -0.66
Lmo4P61969 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.92□□□□□ -0.66
Lmo4P61969 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Lmo4P61969 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.92□□□□□ -0.66
Lmo4P61969 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Gm7029-201ENSMUST00000173226 450 ntBASIC10.92□□□□□ -0.66
Lmo4P61969 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.92□□□□□ -0.66
Lmo4P61969 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lmo4P61969 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Lmo4P61969 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.91□□□□□ -0.66
Lmo4P61969 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.91□□□□□ -0.66
Lmo4P61969 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Lmo4P61969 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Gm16202-201ENSMUST00000117532 544 ntBASIC10.91□□□□□ -0.66
Lmo4P61969 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.91□□□□□ -0.66
Lmo4P61969 Gm37008-201ENSMUST00000195712 319 ntBASIC10.91□□□□□ -0.66
Lmo4P61969 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.91□□□□□ -0.66
Lmo4P61969 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lmo4P61969 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.91□□□□□ -0.66
Lmo4P61969 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lmo4P61969 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.91□□□□□ -0.66
Lmo4P61969 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lmo4P61969 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lmo4P61969 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.9□□□□□ -0.66
Lmo4P61969 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.9□□□□□ -0.66
Lmo4P61969 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lmo4P61969 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lmo4P61969 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lmo4P61969 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lmo4P61969 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lmo4P61969 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lmo4P61969 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Lmo4P61969 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Lmo4P61969 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Lmo4P61969 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms