Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sssca1P56873 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sssca1P56873 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Sssca1P56873 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sssca1P56873 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sssca1P56873 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.95□□□□□ -0.66
Sssca1P56873 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Sssca1P56873 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Sssca1P56873 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.95□□□□□ -0.66
Sssca1P56873 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.95□□□□□ -0.66
Sssca1P56873 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.95□□□□□ -0.66
Sssca1P56873 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sssca1P56873 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Sssca1P56873 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sssca1P56873 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.95□□□□□ -0.66
Sssca1P56873 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Sssca1P56873 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sssca1P56873 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.94□□□□□ -0.66
Sssca1P56873 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Sssca1P56873 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Sssca1P56873 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.94□□□□□ -0.66
Sssca1P56873 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Gm9824-201ENSMUST00000178707 561 ntBASIC10.94□□□□□ -0.66
Sssca1P56873 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.94□□□□□ -0.66
Sssca1P56873 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.94□□□□□ -0.66
Sssca1P56873 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Sssca1P56873 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Sssca1P56873 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sssca1P56873 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms