Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Rab4aP56371 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab4aP56371 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rab4aP56371 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.68□□□□□ -0.7
Rab4aP56371 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.68□□□□□ -0.7
Rab4aP56371 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.68□□□□□ -0.7
Rab4aP56371 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rab4aP56371 Gm17808-201ENSMUST00000200859 894 ntBASIC10.68□□□□□ -0.7
Rab4aP56371 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.68□□□□□ -0.7
Rab4aP56371 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rab4aP56371 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rab4aP56371 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Rab4aP56371 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.68□□□□□ -0.7
Rab4aP56371 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab4aP56371 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.68□□□□□ -0.7
Rab4aP56371 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab4aP56371 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab4aP56371 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab4aP56371 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.67□□□□□ -0.7
Rab4aP56371 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.67□□□□□ -0.7
Rab4aP56371 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.67□□□□□ -0.7
Rab4aP56371 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rab4aP56371 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rab4aP56371 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.67□□□□□ -0.7
Rab4aP56371 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.67□□□□□ -0.7
Rab4aP56371 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm8584-201ENSMUST00000171982 758 ntBASIC10.67□□□□□ -0.7
Rab4aP56371 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Rab4aP56371 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Rab4aP56371 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Rab4aP56371 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC10.67□□□□□ -0.7
Rab4aP56371 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.67□□□□□ -0.7
Rab4aP56371 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Rab4aP56371 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.67□□□□□ -0.7
Rab4aP56371 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab4aP56371 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rab4aP56371 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab4aP56371 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab4aP56371 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rab4aP56371 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab4aP56371 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab4aP56371 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms