Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
NcanP55066 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.16□□□□□ -0.14
NcanP55066 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Gm23699-201ENSMUST00000158835 135 ntBASIC14.16□□□□□ -0.14
NcanP55066 Gm26361-201ENSMUST00000158868 186 ntBASIC14.16□□□□□ -0.14
NcanP55066 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Gm17208-201ENSMUST00000168388 535 ntBASIC14.16□□□□□ -0.14
NcanP55066 Gm2445-201ENSMUST00000182798 989 ntBASIC14.16□□□□□ -0.14
NcanP55066 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.16□□□□□ -0.14
NcanP55066 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NcanP55066 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
NcanP55066 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.16□□□□□ -0.14
NcanP55066 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.16□□□□□ -0.14
NcanP55066 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.16□□□□□ -0.14
NcanP55066 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.16□□□□□ -0.14
NcanP55066 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.15□□□□□ -0.14
NcanP55066 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NcanP55066 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.15□□□□□ -0.14
NcanP55066 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NcanP55066 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Gm13875-201ENSMUST00000120162 282 ntBASIC14.15□□□□□ -0.14
NcanP55066 Gm25545-201ENSMUST00000122673 323 ntBASIC14.15□□□□□ -0.14
NcanP55066 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Gm27046-201ENSMUST00000182160 463 ntBASIC14.15□□□□□ -0.14
NcanP55066 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NcanP55066 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.15□□□□□ -0.14
NcanP55066 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NcanP55066 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.15□□□□□ -0.14
NcanP55066 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NcanP55066 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
NcanP55066 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NcanP55066 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NcanP55066 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NcanP55066 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms