Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ddx6P54823 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ddx6P54823 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Mir1247-201ENSMUST00000116706 82 ntBASIC13.74□□□□□ -0.21
Ddx6P54823 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.74□□□□□ -0.21
Ddx6P54823 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
Ddx6P54823 Gm19309-201ENSMUST00000218295 205 ntBASIC13.74□□□□□ -0.21
Ddx6P54823 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.74□□□□□ -0.21
Ddx6P54823 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ddx6P54823 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.74□□□□□ -0.21
Ddx6P54823 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.74□□□□□ -0.21
Ddx6P54823 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ddx6P54823 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx6P54823 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ddx6P54823 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Ddx6P54823 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.73□□□□□ -0.21
Ddx6P54823 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.73□□□□□ -0.21
Ddx6P54823 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Ddx6P54823 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.73□□□□□ -0.21
Ddx6P54823 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Gm2231-201ENSMUST00000125661 612 ntBASIC13.73□□□□□ -0.21
Ddx6P54823 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.73□□□□□ -0.21
Ddx6P54823 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.73□□□□□ -0.21
Ddx6P54823 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.73□□□□□ -0.21
Ddx6P54823 Gm45880-201ENSMUST00000213041 853 ntBASIC13.73□□□□□ -0.21
Ddx6P54823 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Gm10146-201ENSMUST00000072739 309 ntBASIC13.73□□□□□ -0.21
Ddx6P54823 Snora73a-201ENSMUST00000082453 205 ntBASIC13.73□□□□□ -0.21
Ddx6P54823 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.73□□□□□ -0.21
Ddx6P54823 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ddx6P54823 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.73□□□□□ -0.21
Ddx6P54823 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ddx6P54823 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.73□□□□□ -0.21
Ddx6P54823 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx6P54823 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ddx6P54823 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.72□□□□□ -0.21
Ddx6P54823 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ddx6P54823 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.72□□□□□ -0.21
Ddx6P54823 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.72□□□□□ -0.21
Ddx6P54823 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Gm43179-201ENSMUST00000198797 275 ntBASIC13.72□□□□□ -0.21
Ddx6P54823 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.72□□□□□ -0.21
Ddx6P54823 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Ddx6P54823 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ddx6P54823 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms