Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.46□□□□□ -0.25
Atxn1P54254 Gm26464-201ENSMUST00000157094 305 ntBASIC13.46□□□□□ -0.25
Atxn1P54254 Gm8810-201ENSMUST00000172895 754 ntBASIC13.46□□□□□ -0.25
Atxn1P54254 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Atxn1P54254 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.46□□□□□ -0.25
Atxn1P54254 Nsd1-205ENSMUST00000224693 852 ntBASIC13.46□□□□□ -0.25
Atxn1P54254 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.46□□□□□ -0.25
Atxn1P54254 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.46□□□□□ -0.25
Atxn1P54254 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.46□□□□□ -0.26
Atxn1P54254 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atxn1P54254 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atxn1P54254 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atxn1P54254 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.46□□□□□ -0.26
Atxn1P54254 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Atxn1P54254 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Atxn1P54254 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atxn1P54254 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atxn1P54254 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Atxn1P54254 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.45□□□□□ -0.26
Atxn1P54254 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.45□□□□□ -0.26
Atxn1P54254 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.45□□□□□ -0.26
Atxn1P54254 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Gm22902-201ENSMUST00000158488 302 ntBASIC13.45□□□□□ -0.26
Atxn1P54254 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.45□□□□□ -0.26
Atxn1P54254 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.45□□□□□ -0.26
Atxn1P54254 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Atxn1P54254 Gm27331-201ENSMUST00000183705 60 ntBASIC13.45□□□□□ -0.26
Atxn1P54254 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Gm37259-201ENSMUST00000193903 849 ntBASIC13.45□□□□□ -0.26
Atxn1P54254 Gm45865-201ENSMUST00000211815 945 ntBASIC13.45□□□□□ -0.26
Atxn1P54254 Gm29705-201ENSMUST00000212598 474 ntBASIC13.45□□□□□ -0.26
Atxn1P54254 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atxn1P54254 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Atxn1P54254 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Atxn1P54254 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Acot6-202ENSMUST00000222921 3622 ntBASIC13.44□□□□□ -0.26
Atxn1P54254 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.44□□□□□ -0.26
Atxn1P54254 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.44□□□□□ -0.26
Atxn1P54254 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Gm15371-201ENSMUST00000117057 784 ntBASIC13.44□□□□□ -0.26
Atxn1P54254 Gm12997-201ENSMUST00000120207 640 ntBASIC13.44□□□□□ -0.26
Atxn1P54254 Gm1335-201ENSMUST00000121653 386 ntBASIC13.44□□□□□ -0.26
Atxn1P54254 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.44□□□□□ -0.26
Atxn1P54254 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.44□□□□□ -0.26
Atxn1P54254 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.44□□□□□ -0.26
Atxn1P54254 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.44□□□□□ -0.26
Atxn1P54254 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.44□□□□□ -0.26
Atxn1P54254 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.44□□□□□ -0.26
Atxn1P54254 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.44□□□□□ -0.26
Atxn1P54254 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Atxn1P54254 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Atxn1P54254 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Atxn1P54254 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Atxn1P54254 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atxn1P54254 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms