Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox3P53784 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.01□□□□□ -0.33
Sox3P53784 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Sox3P53784 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox3P53784 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Gm11814-201ENSMUST00000119515 929 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Gm26461-201ENSMUST00000175064 290 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Gm38241-201ENSMUST00000192641 898 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Sox3P53784 Gm7399-201ENSMUST00000032395 858 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.01□□□□□ -0.33
Sox3P53784 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Sox3P53784 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox3P53784 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox3P53784 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox3P53784 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox3P53784 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox3P53784 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13□□□□□ -0.33
Sox3P53784 Gm5279-201ENSMUST00000199575 745 ntBASIC13□□□□□ -0.33
Sox3P53784 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13□□□□□ -0.33
Sox3P53784 AC156560.2-201ENSMUST00000221232 264 ntBASIC13□□□□□ -0.33
Sox3P53784 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Sox3P53784 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Gm38346-201ENSMUST00000192379 2639 ntBASIC13□□□□□ -0.33
Sox3P53784 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Sox3P53784 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms