Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sox1P53783 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox1P53783 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox1P53783 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Sox1P53783 Gm25214-201ENSMUST00000104573 129 ntBASIC13.78□□□□□ -0.2
Sox1P53783 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.78□□□□□ -0.2
Sox1P53783 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox1P53783 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.78□□□□□ -0.2
Sox1P53783 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.78□□□□□ -0.2
Sox1P53783 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.78□□□□□ -0.2
Sox1P53783 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Sox1P53783 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.78□□□□□ -0.2
Sox1P53783 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Sox1P53783 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.78□□□□□ -0.2
Sox1P53783 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.78□□□□□ -0.2
Sox1P53783 Gm19163-201ENSMUST00000223313 780 ntBASIC13.78□□□□□ -0.2
Sox1P53783 Spcs1-203ENSMUST00000226374 592 ntBASIC13.78□□□□□ -0.2
Sox1P53783 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sox1P53783 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.78□□□□□ -0.2
Sox1P53783 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.78□□□□□ -0.2
Sox1P53783 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sox1P53783 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Sox1P53783 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sox1P53783 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox1P53783 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sox1P53783 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox1P53783 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox1P53783 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sox1P53783 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox1P53783 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sox1P53783 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.77□□□□□ -0.21
Sox1P53783 Gm11531-201ENSMUST00000117614 555 ntBASIC13.77□□□□□ -0.21
Sox1P53783 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Sox1P53783 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.77□□□□□ -0.21
Sox1P53783 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sox1P53783 Gm8738-201ENSMUST00000172606 329 ntBASIC13.77□□□□□ -0.21
Sox1P53783 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox1P53783 Gm25700-201ENSMUST00000177693 110 ntBASIC13.77□□□□□ -0.21
Sox1P53783 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox1P53783 Gm27552-201ENSMUST00000183351 62 ntBASIC13.77□□□□□ -0.21
Sox1P53783 Gm27844-201ENSMUST00000183613 62 ntBASIC13.77□□□□□ -0.21
Sox1P53783 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox1P53783 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox1P53783 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sox1P53783 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox1P53783 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox1P53783 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox1P53783 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox1P53783 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Sox1P53783 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Sox1P53783 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox1P53783 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sox1P53783 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Sox1P53783 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms