Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lhx3P50481 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lhx3P50481 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
Lhx3P50481 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Lhx3P50481 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Lhx3P50481 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.71□□□□□ -0.21
Lhx3P50481 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lhx3P50481 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.71□□□□□ -0.21
Lhx3P50481 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.71□□□□□ -0.21
Lhx3P50481 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Lhx3P50481 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.71□□□□□ -0.21
Lhx3P50481 Gm8598-201ENSMUST00000221184 836 ntBASIC13.71□□□□□ -0.21
Lhx3P50481 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.71□□□□□ -0.21
Lhx3P50481 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx3P50481 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lhx3P50481 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx3P50481 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Lhx3P50481 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.71□□□□□ -0.22
Lhx3P50481 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Lhx3P50481 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx3P50481 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.71□□□□□ -0.22
Lhx3P50481 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx3P50481 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx3P50481 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx3P50481 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx3P50481 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lhx3P50481 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lhx3P50481 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.7□□□□□ -0.22
Lhx3P50481 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.7□□□□□ -0.22
Lhx3P50481 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.7□□□□□ -0.22
Lhx3P50481 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.7□□□□□ -0.22
Lhx3P50481 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.7□□□□□ -0.22
Lhx3P50481 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.7□□□□□ -0.22
Lhx3P50481 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.7□□□□□ -0.22
Lhx3P50481 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Gm38671-201ENSMUST00000200573 130 ntBASIC13.7□□□□□ -0.22
Lhx3P50481 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.7□□□□□ -0.22
Lhx3P50481 Gm17794-201ENSMUST00000220252 955 ntBASIC13.7□□□□□ -0.22
Lhx3P50481 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Lhx3P50481 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.7□□□□□ -0.22
Lhx3P50481 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.7□□□□□ -0.22
Lhx3P50481 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.7□□□□□ -0.22
Lhx3P50481 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lhx3P50481 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lhx3P50481 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lhx3P50481 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.7□□□□□ -0.22
Lhx3P50481 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx3P50481 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Lhx3P50481 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx3P50481 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.69□□□□□ -0.22
Lhx3P50481 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms