Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rfx3P48381 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfx3P48381 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.27□□□□□ -0.44
Rfx3P48381 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Rfx3P48381 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Rfx3P48381 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Rfx3P48381 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfx3P48381 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.27□□□□□ -0.44
Rfx3P48381 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfx3P48381 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rfx3P48381 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.27□□□□□ -0.45
Rfx3P48381 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rfx3P48381 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfx3P48381 Gm29741-201ENSMUST00000192667 421 ntBASIC12.27□□□□□ -0.45
Rfx3P48381 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.27□□□□□ -0.45
Rfx3P48381 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.27□□□□□ -0.45
Rfx3P48381 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfx3P48381 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rfx3P48381 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfx3P48381 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Rfx3P48381 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfx3P48381 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.27□□□□□ -0.45
Rfx3P48381 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfx3P48381 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Rfx3P48381 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rfx3P48381 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Rfx3P48381 Gm25144-201ENSMUST00000179561 110 ntBASIC12.26□□□□□ -0.45
Rfx3P48381 Gm25352-201ENSMUST00000179815 110 ntBASIC12.26□□□□□ -0.45
Rfx3P48381 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Gm10576-201ENSMUST00000191927 825 ntBASIC12.26□□□□□ -0.45
Rfx3P48381 Shd-206ENSMUST00000225145 998 ntBASIC12.26□□□□□ -0.45
Rfx3P48381 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.26□□□□□ -0.45
Rfx3P48381 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rfx3P48381 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.26□□□□□ -0.45
Rfx3P48381 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfx3P48381 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.26□□□□□ -0.45
Rfx3P48381 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rfx3P48381 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rfx3P48381 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.25□□□□□ -0.45
Rfx3P48381 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Rfx3P48381 Gm12428-201ENSMUST00000119844 727 ntBASIC12.25□□□□□ -0.45
Rfx3P48381 Gm25948-201ENSMUST00000175334 112 ntBASIC12.25□□□□□ -0.45
Rfx3P48381 Gm2445-201ENSMUST00000182798 989 ntBASIC12.25□□□□□ -0.45
Rfx3P48381 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rfx3P48381 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms