Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hist1h1aP43275 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.21□□□□□ -0.62
Hist1h1aP43275 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hist1h1aP43275 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Hist1h1aP43275 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.21□□□□□ -0.62
Hist1h1aP43275 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Hist1h1aP43275 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.21□□□□□ -0.62
Hist1h1aP43275 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.2□□□□□ -0.62
Hist1h1aP43275 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.2□□□□□ -0.62
Hist1h1aP43275 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.2□□□□□ -0.62
Hist1h1aP43275 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.2□□□□□ -0.62
Hist1h1aP43275 Gm44771-201ENSMUST00000206975 626 ntBASIC11.2□□□□□ -0.62
Hist1h1aP43275 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.2□□□□□ -0.62
Hist1h1aP43275 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.2□□□□□ -0.62
Hist1h1aP43275 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hist1h1aP43275 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.19□□□□□ -0.62
Hist1h1aP43275 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Gm27631-201ENSMUST00000184163 466 ntBASIC11.19□□□□□ -0.62
Hist1h1aP43275 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Gm18027-201ENSMUST00000218947 619 ntBASIC11.19□□□□□ -0.62
Hist1h1aP43275 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.19□□□□□ -0.62
Hist1h1aP43275 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hist1h1aP43275 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hist1h1aP43275 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hist1h1aP43275 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Hist1h1aP43275 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hist1h1aP43275 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hist1h1aP43275 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hist1h1aP43275 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hist1h1aP43275 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hist1h1aP43275 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms