Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.06□□□□□ -0.16
HttP42859 Gm7541-201ENSMUST00000118361 535 ntBASIC14.06□□□□□ -0.16
HttP42859 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
HttP42859 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.06□□□□□ -0.16
HttP42859 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HttP42859 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Gm11354-201ENSMUST00000121974 422 ntBASIC14.06□□□□□ -0.16
HttP42859 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.06□□□□□ -0.16
HttP42859 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HttP42859 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HttP42859 Gm22058-201ENSMUST00000083393 310 ntBASIC14.06□□□□□ -0.16
HttP42859 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HttP42859 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.05□□□□□ -0.16
HttP42859 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.05□□□□□ -0.16
HttP42859 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HttP42859 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.05□□□□□ -0.16
HttP42859 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.05□□□□□ -0.16
HttP42859 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.05□□□□□ -0.16
HttP42859 Gm34023-201ENSMUST00000195539 217 ntBASIC14.05□□□□□ -0.16
HttP42859 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
HttP42859 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.05□□□□□ -0.16
HttP42859 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Gm23949-201ENSMUST00000104027 127 ntBASIC14.05□□□□□ -0.16
HttP42859 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.05□□□□□ -0.16
HttP42859 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.05□□□□□ -0.16
HttP42859 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.05□□□□□ -0.16
HttP42859 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HttP42859 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.05□□□□□ -0.16
HttP42859 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HttP42859 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HttP42859 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Gm8492-201ENSMUST00000182375 987 ntBASIC14.04□□□□□ -0.16
HttP42859 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.04□□□□□ -0.16
HttP42859 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.04□□□□□ -0.16
HttP42859 Gm19187-201ENSMUST00000206781 892 ntBASIC14.04□□□□□ -0.16
HttP42859 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.04□□□□□ -0.16
HttP42859 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HttP42859 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HttP42859 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms