Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Efs-202ENSMUST00000227037 2540 ntBASIC13.87□□□□□ -0.19
Cxcl12P40224 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm6447-201ENSMUST00000118905 835 ntBASIC13.87□□□□□ -0.19
Cxcl12P40224 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm8099-201ENSMUST00000200510 742 ntBASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.87□□□□□ -0.19
Cxcl12P40224 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.87□□□□□ -0.19
Cxcl12P40224 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cxcl12P40224 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cxcl12P40224 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Gm12502-201ENSMUST00000120197 444 ntBASIC13.86□□□□□ -0.19
Cxcl12P40224 Gm13570-201ENSMUST00000140763 309 ntBASIC13.86□□□□□ -0.19
Cxcl12P40224 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Gm8584-201ENSMUST00000171982 758 ntBASIC13.86□□□□□ -0.19
Cxcl12P40224 Gm2445-201ENSMUST00000182798 989 ntBASIC13.86□□□□□ -0.19
Cxcl12P40224 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Mir7032-201ENSMUST00000185154 79 ntBASIC13.86□□□□□ -0.19
Cxcl12P40224 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.86□□□□□ -0.19
Cxcl12P40224 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Cxcl12P40224 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl12P40224 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.85□□□□□ -0.19
Cxcl12P40224 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Cxcl12P40224 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.85□□□□□ -0.19
Cxcl12P40224 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cxcl12P40224 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cxcl12P40224 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms