Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LdlrP35951 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Syt7-204ENSMUST00000223586 1344 ntBASIC13.53□□□□□ -0.24
LdlrP35951 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.53□□□□□ -0.24
LdlrP35951 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LdlrP35951 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LdlrP35951 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
LdlrP35951 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LdlrP35951 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.52□□□□□ -0.25
LdlrP35951 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.52□□□□□ -0.25
LdlrP35951 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LdlrP35951 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Gm37714-201ENSMUST00000194742 342 ntBASIC13.52□□□□□ -0.25
LdlrP35951 Gm9794-201ENSMUST00000202370 423 ntBASIC13.52□□□□□ -0.25
LdlrP35951 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.52□□□□□ -0.25
LdlrP35951 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.52□□□□□ -0.25
LdlrP35951 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.52□□□□□ -0.25
LdlrP35951 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LdlrP35951 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LdlrP35951 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LdlrP35951 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.52□□□□□ -0.25
LdlrP35951 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LdlrP35951 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LdlrP35951 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LdlrP35951 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LdlrP35951 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.51□□□□□ -0.25
LdlrP35951 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.51□□□□□ -0.25
LdlrP35951 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Syt7-205ENSMUST00000224135 1557 ntBASIC13.51□□□□□ -0.25
LdlrP35951 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.51□□□□□ -0.25
LdlrP35951 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.51□□□□□ -0.25
LdlrP35951 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.51□□□□□ -0.25
LdlrP35951 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
LdlrP35951 Gm16215-201ENSMUST00000161990 637 ntBASIC13.51□□□□□ -0.25
LdlrP35951 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LdlrP35951 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Gm27631-201ENSMUST00000184163 466 ntBASIC13.51□□□□□ -0.25
LdlrP35951 Gm27838-201ENSMUST00000184829 128 ntBASIC13.51□□□□□ -0.25
LdlrP35951 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.51□□□□□ -0.25
LdlrP35951 Gm18766-201ENSMUST00000189811 808 ntBASIC13.51□□□□□ -0.25
LdlrP35951 Gm44855-201ENSMUST00000205725 362 ntBASIC13.51□□□□□ -0.25
LdlrP35951 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Gm7775-201ENSMUST00000218871 853 ntBASIC13.51□□□□□ -0.25
LdlrP35951 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LdlrP35951 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LdlrP35951 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.51□□□□□ -0.25
LdlrP35951 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms