Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxa1P35582 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.55□□□□□ -0.4
Foxa1P35582 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxa1P35582 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Foxa1P35582 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.55□□□□□ -0.4
Foxa1P35582 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxa1P35582 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.55□□□□□ -0.4
Foxa1P35582 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.55□□□□□ -0.4
Foxa1P35582 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Matn2-206ENSMUST00000228570 2798 ntBASIC12.55□□□□□ -0.4
Foxa1P35582 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.55□□□□□ -0.4
Foxa1P35582 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Foxa1P35582 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Foxa1P35582 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Foxa1P35582 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxa1P35582 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxa1P35582 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxa1P35582 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Foxa1P35582 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxa1P35582 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Gm12341-201ENSMUST00000119724 503 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Mir6392-201ENSMUST00000184924 108 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxa1P35582 Gm18624-201ENSMUST00000220966 658 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.54□□□□□ -0.4
Foxa1P35582 Gm5161-201ENSMUST00000075243 853 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Foxa1P35582 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Foxa1P35582 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxa1P35582 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.54□□□□□ -0.4
Foxa1P35582 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxa1P35582 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Foxa1P35582 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.53□□□□□ -0.4
Foxa1P35582 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Foxa1P35582 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.53□□□□□ -0.4
Foxa1P35582 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.53□□□□□ -0.4
Foxa1P35582 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.53□□□□□ -0.4
Foxa1P35582 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Foxa1P35582 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.53□□□□□ -0.4
Foxa1P35582 Gm17330-201ENSMUST00000221047 165 ntBASIC12.53□□□□□ -0.4
Foxa1P35582 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.53□□□□□ -0.4
Foxa1P35582 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Foxa1P35582 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Foxa1P35582 Gm24447-201ENSMUST00000083977 338 ntBASIC12.53□□□□□ -0.4
Foxa1P35582 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms