Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Slc6a11P31650 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.91□□□□□ -0.34
Slc6a11P31650 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Gm29541-201ENSMUST00000191351 678 ntBASIC12.91□□□□□ -0.34
Slc6a11P31650 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc6a11P31650 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
Slc6a11P31650 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a11P31650 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Slc6a11P31650 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a11P31650 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Slc6a11P31650 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a11P31650 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a11P31650 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Gm13015-201ENSMUST00000118674 204 ntBASIC12.9□□□□□ -0.34
Slc6a11P31650 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a11P31650 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a11P31650 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a11P31650 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a11P31650 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Slc6a11P31650 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.9□□□□□ -0.35
Slc6a11P31650 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Slc6a11P31650 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Gm11478-201ENSMUST00000117851 599 ntBASIC12.89□□□□□ -0.35
Slc6a11P31650 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Gm8515-201ENSMUST00000194852 576 ntBASIC12.89□□□□□ -0.35
Slc6a11P31650 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Gm18027-201ENSMUST00000218947 619 ntBASIC12.89□□□□□ -0.35
Slc6a11P31650 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.89□□□□□ -0.35
Slc6a11P31650 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a11P31650 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a11P31650 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a11P31650 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Slc6a11P31650 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Slc6a11P31650 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.88□□□□□ -0.35
Slc6a11P31650 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.88□□□□□ -0.35
Slc6a11P31650 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Slc6a11P31650 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.88□□□□□ -0.35
Slc6a11P31650 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a11P31650 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms