Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Nckap1P28660 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nckap1P28660 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Nckap1P28660 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nckap1P28660 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Nckap1P28660 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.49□□□□□ -0.25
Nckap1P28660 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.49□□□□□ -0.25
Nckap1P28660 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Nckap1P28660 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Gm24196-201ENSMUST00000179161 110 ntBASIC13.49□□□□□ -0.25
Nckap1P28660 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.49□□□□□ -0.25
Nckap1P28660 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.49□□□□□ -0.25
Nckap1P28660 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.49□□□□□ -0.25
Nckap1P28660 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.49□□□□□ -0.25
Nckap1P28660 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.49□□□□□ -0.25
Nckap1P28660 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nckap1P28660 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nckap1P28660 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nckap1P28660 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Gm14660-201ENSMUST00000119809 575 ntBASIC13.48□□□□□ -0.25
Nckap1P28660 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.48□□□□□ -0.25
Nckap1P28660 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nckap1P28660 Gm22331-201ENSMUST00000158066 136 ntBASIC13.48□□□□□ -0.25
Nckap1P28660 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nckap1P28660 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.48□□□□□ -0.25
Nckap1P28660 Gm43818-201ENSMUST00000200605 466 ntBASIC13.48□□□□□ -0.25
Nckap1P28660 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.48□□□□□ -0.25
Nckap1P28660 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.48□□□□□ -0.25
Nckap1P28660 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Nckap1P28660 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.48□□□□□ -0.25
Nckap1P28660 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nckap1P28660 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms