Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col2a1P28481 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.18■□□□□ 0.02
Col2a1P28481 Gm13297-201ENSMUST00000120205 934 ntBASIC15.18■□□□□ 0.02
Col2a1P28481 Gm13350-201ENSMUST00000120519 479 ntBASIC15.18■□□□□ 0.02
Col2a1P28481 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Col2a1P28481 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col2a1P28481 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.18■□□□□ 0.02
Col2a1P28481 Gm17208-201ENSMUST00000168388 535 ntBASIC15.18■□□□□ 0.02
Col2a1P28481 Gm7584-201ENSMUST00000175829 940 ntBASIC15.18■□□□□ 0.02
Col2a1P28481 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.18■□□□□ 0.02
Col2a1P28481 Gm19931-201ENSMUST00000198920 368 ntBASIC15.18■□□□□ 0.02
Col2a1P28481 Gm9368-201ENSMUST00000219348 831 ntBASIC15.18■□□□□ 0.02
Col2a1P28481 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col2a1P28481 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col2a1P28481 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col2a1P28481 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col2a1P28481 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col2a1P28481 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col2a1P28481 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col2a1P28481 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col2a1P28481 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Col2a1P28481 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col2a1P28481 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Col2a1P28481 Gm22323-201ENSMUST00000103832 109 ntBASIC15.17■□□□□ 0.02
Col2a1P28481 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.17■□□□□ 0.02
Col2a1P28481 Gm4986-201ENSMUST00000119731 549 ntBASIC15.17■□□□□ 0.02
Col2a1P28481 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.17■□□□□ 0.02
Col2a1P28481 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.17■□□□□ 0.02
Col2a1P28481 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.17■□□□□ 0.02
Col2a1P28481 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.17■□□□□ 0.02
Col2a1P28481 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col2a1P28481 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col2a1P28481 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col2a1P28481 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col2a1P28481 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.16■□□□□ 0.02
Col2a1P28481 Gm11964-201ENSMUST00000120982 444 ntBASIC15.16■□□□□ 0.02
Col2a1P28481 Gm12291-201ENSMUST00000121627 311 ntBASIC15.16■□□□□ 0.02
Col2a1P28481 Mospd4-201ENSMUST00000180618 576 ntBASIC15.16■□□□□ 0.02
Col2a1P28481 Gm6621-201ENSMUST00000193251 772 ntBASIC15.16■□□□□ 0.02
Col2a1P28481 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Gm45865-201ENSMUST00000211815 945 ntBASIC15.16■□□□□ 0.02
Col2a1P28481 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.16■□□□□ 0.02
Col2a1P28481 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col2a1P28481 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Col2a1P28481 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Col2a1P28481 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col2a1P28481 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col2a1P28481 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
Col2a1P28481 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.16■□□□□ 0.02
Col2a1P28481 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.15■□□□□ 0.02
Col2a1P28481 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.15■□□□□ 0.02
Col2a1P28481 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col2a1P28481 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col2a1P28481 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col2a1P28481 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col2a1P28481 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col2a1P28481 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col2a1P28481 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.15■□□□□ 0.02
Col2a1P28481 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.15■□□□□ 0.02
Col2a1P28481 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.15■□□□□ 0.02
Col2a1P28481 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.15■□□□□ 0.02
Col2a1P28481 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col2a1P28481 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.15■□□□□ 0.02
Col2a1P28481 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms