Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.58□□□□□ -0.71
Ccl6P27784 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl6P27784 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl6P27784 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl6P27784 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl6P27784 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Gm12585-201ENSMUST00000117307 290 ntBASIC10.58□□□□□ -0.72
Ccl6P27784 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.58□□□□□ -0.72
Ccl6P27784 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Ccl6P27784 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccl6P27784 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccl6P27784 Gm44872-201ENSMUST00000207864 420 ntBASIC10.58□□□□□ -0.72
Ccl6P27784 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccl6P27784 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Ccl6P27784 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl6P27784 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl6P27784 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl6P27784 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl6P27784 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.57□□□□□ -0.72
Ccl6P27784 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ccl6P27784 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Ccl6P27784 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl6P27784 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl6P27784 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Mir698-201ENSMUST00000102164 109 ntBASIC10.57□□□□□ -0.72
Ccl6P27784 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.57□□□□□ -0.72
Ccl6P27784 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.57□□□□□ -0.72
Ccl6P27784 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.57□□□□□ -0.72
Ccl6P27784 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.57□□□□□ -0.72
Ccl6P27784 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ccl6P27784 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl6P27784 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl6P27784 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ccl6P27784 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl6P27784 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl6P27784 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms