Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cd40P27512 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Cd40P27512 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.27□□□□□ -0.45
Cd40P27512 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Mir6392-201ENSMUST00000184924 108 ntBASIC12.27□□□□□ -0.45
Cd40P27512 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.27□□□□□ -0.45
Cd40P27512 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.27□□□□□ -0.45
Cd40P27512 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.27□□□□□ -0.45
Cd40P27512 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cd40P27512 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40P27512 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cd40P27512 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Cd40P27512 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40P27512 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Cd40P27512 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Cd40P27512 Gm15371-201ENSMUST00000117057 784 ntBASIC12.26□□□□□ -0.45
Cd40P27512 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cd40P27512 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.26□□□□□ -0.45
Cd40P27512 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Mir7654-201ENSMUST00000185082 70 ntBASIC12.26□□□□□ -0.45
Cd40P27512 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.26□□□□□ -0.45
Cd40P27512 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.26□□□□□ -0.45
Cd40P27512 Gm38223-201ENSMUST00000194484 695 ntBASIC12.26□□□□□ -0.45
Cd40P27512 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.26□□□□□ -0.45
Cd40P27512 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.26□□□□□ -0.45
Cd40P27512 Gm5186-201ENSMUST00000218781 920 ntBASIC12.26□□□□□ -0.45
Cd40P27512 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cd40P27512 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.26□□□□□ -0.45
Cd40P27512 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cd40P27512 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.26□□□□□ -0.45
Cd40P27512 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.26□□□□□ -0.45
Cd40P27512 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40P27512 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cd40P27512 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40P27512 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
Cd40P27512 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40P27512 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.25□□□□□ -0.45
Cd40P27512 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cd40P27512 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cd40P27512 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Cd40P27512 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.25□□□□□ -0.45
Cd40P27512 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cd40P27512 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cd40P27512 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40P27512 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms