Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Pde6bP23440 Snora78-201ENSMUST00000158630 128 ntBASIC14.82□□□□□ -0.04
Pde6bP23440 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.82□□□□□ -0.04
Pde6bP23440 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pde6bP23440 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pde6bP23440 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.81□□□□□ -0.04
Pde6bP23440 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pde6bP23440 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.81□□□□□ -0.04
Pde6bP23440 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pde6bP23440 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.81□□□□□ -0.04
Pde6bP23440 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pde6bP23440 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Gm27731-201ENSMUST00000185192 107 ntBASIC14.81□□□□□ -0.04
Pde6bP23440 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.81□□□□□ -0.04
Pde6bP23440 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.81□□□□□ -0.04
Pde6bP23440 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6bP23440 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pde6bP23440 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.8□□□□□ -0.04
Pde6bP23440 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pde6bP23440 Gm13612-201ENSMUST00000119276 390 ntBASIC14.8□□□□□ -0.04
Pde6bP23440 Gm14660-201ENSMUST00000119809 575 ntBASIC14.8□□□□□ -0.04
Pde6bP23440 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Pde6bP23440 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.8□□□□□ -0.04
Pde6bP23440 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.8□□□□□ -0.04
Pde6bP23440 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.8□□□□□ -0.04
Pde6bP23440 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.8□□□□□ -0.04
Pde6bP23440 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pde6bP23440 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.8□□□□□ -0.04
Pde6bP23440 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pde6bP23440 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6bP23440 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pde6bP23440 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pde6bP23440 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pde6bP23440 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.79□□□□□ -0.04
Pde6bP23440 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pde6bP23440 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Mir6420-201ENSMUST00000185032 102 ntBASIC14.79□□□□□ -0.04
Pde6bP23440 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.79□□□□□ -0.04
Pde6bP23440 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.79□□□□□ -0.04
Pde6bP23440 Gm42550-201ENSMUST00000201553 960 ntBASIC14.79□□□□□ -0.04
Pde6bP23440 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.79□□□□□ -0.04
Pde6bP23440 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
Pde6bP23440 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pde6bP23440 Gm10012-201ENSMUST00000078252 192 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms