Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hoxa4P06798 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.33□□□□□ -0.28
Hoxa4P06798 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hoxa4P06798 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hoxa4P06798 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.32□□□□□ -0.28
Hoxa4P06798 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.32□□□□□ -0.28
Hoxa4P06798 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.32□□□□□ -0.28
Hoxa4P06798 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Gm6152-201ENSMUST00000151704 340 ntBASIC13.32□□□□□ -0.28
Hoxa4P06798 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Hoxa4P06798 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.32□□□□□ -0.28
Hoxa4P06798 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
Hoxa4P06798 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa4P06798 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.31□□□□□ -0.28
Hoxa4P06798 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hoxa4P06798 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.31□□□□□ -0.28
Hoxa4P06798 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm10012-201ENSMUST00000078252 192 ntBASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm5356-201ENSMUST00000093326 615 ntBASIC13.31□□□□□ -0.28
Hoxa4P06798 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa4P06798 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms