Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Vti1aO89116 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.63□□□□□ -0.07
Vti1aO89116 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.63□□□□□ -0.07
Vti1aO89116 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.63□□□□□ -0.07
Vti1aO89116 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.63□□□□□ -0.07
Vti1aO89116 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.63□□□□□ -0.07
Vti1aO89116 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.63□□□□□ -0.07
Vti1aO89116 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.62□□□□□ -0.07
Vti1aO89116 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vti1aO89116 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.62□□□□□ -0.07
Vti1aO89116 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vti1aO89116 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Gm12485-201ENSMUST00000119641 291 ntBASIC14.62□□□□□ -0.07
Vti1aO89116 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.62□□□□□ -0.07
Vti1aO89116 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Vti1aO89116 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vti1aO89116 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.62□□□□□ -0.07
Vti1aO89116 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vti1aO89116 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.62□□□□□ -0.07
Vti1aO89116 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.62□□□□□ -0.07
Vti1aO89116 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1aO89116 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Vti1aO89116 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vti1aO89116 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.61□□□□□ -0.07
Vti1aO89116 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Gm11814-201ENSMUST00000119515 929 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.61□□□□□ -0.07
Vti1aO89116 Gm8652-201ENSMUST00000181363 964 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Gm27772-201ENSMUST00000184900 187 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Gm2495-201ENSMUST00000191160 466 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Gm7287-201ENSMUST00000205267 602 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.61□□□□□ -0.07
Vti1aO89116 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.61□□□□□ -0.07
Vti1aO89116 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vti1aO89116 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vti1aO89116 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Vti1aO89116 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.61□□□□□ -0.07
Vti1aO89116 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vti1aO89116 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1aO89116 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1aO89116 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vti1aO89116 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1aO89116 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vti1aO89116 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Vti1aO89116 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.6□□□□□ -0.07
Vti1aO89116 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1aO89116 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1aO89116 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1aO89116 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1aO89116 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms