Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CcnkO88874 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CcnkO88874 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Gm4995-201ENSMUST00000117247 432 ntBASIC12.09□□□□□ -0.47
CcnkO88874 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.09□□□□□ -0.47
CcnkO88874 Auts2-212ENSMUST00000178555 309 ntBASIC12.09□□□□□ -0.47
CcnkO88874 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CcnkO88874 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.09□□□□□ -0.47
CcnkO88874 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CcnkO88874 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CcnkO88874 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CcnkO88874 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.09□□□□□ -0.47
CcnkO88874 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.09□□□□□ -0.47
CcnkO88874 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
CcnkO88874 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.09□□□□□ -0.47
CcnkO88874 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcnkO88874 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CcnkO88874 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CcnkO88874 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CcnkO88874 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.08□□□□□ -0.48
CcnkO88874 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
CcnkO88874 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.08□□□□□ -0.48
CcnkO88874 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CcnkO88874 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.08□□□□□ -0.48
CcnkO88874 Gm25287-201ENSMUST00000103846 110 ntBASIC12.08□□□□□ -0.48
CcnkO88874 Gm22918-201ENSMUST00000103855 110 ntBASIC12.08□□□□□ -0.48
CcnkO88874 Gm12882-201ENSMUST00000121696 517 ntBASIC12.08□□□□□ -0.48
CcnkO88874 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CcnkO88874 Gm24513-201ENSMUST00000174964 138 ntBASIC12.08□□□□□ -0.48
CcnkO88874 Gm27397-201ENSMUST00000184997 107 ntBASIC12.08□□□□□ -0.48
CcnkO88874 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.08□□□□□ -0.48
CcnkO88874 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
CcnkO88874 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.08□□□□□ -0.48
CcnkO88874 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CcnkO88874 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.08□□□□□ -0.48
CcnkO88874 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcnkO88874 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Mir6990-201ENSMUST00000183724 91 ntBASIC12.07□□□□□ -0.48
CcnkO88874 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
CcnkO88874 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.07□□□□□ -0.48
CcnkO88874 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CcnkO88874 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms